Basically, I've moved over the past few months and finally got settled in and had time to work on it.
I've been working through small bugs (mostly idle/carb issues) and am back to my original problem. The bike Will crank and idle up fine. It warms up good, but the problem is it breaks up around mid-RPM's. Regardless of how much throttle I give it, it will start breaking up around 3-3.5k and is breaking up hard at 5k. It will want to stay at 5k like a rev limiter, but with more throttle it can be coaxed to rev slowly higher, missing the entire time. I also am pretty sure it's popping upon deceleration.
I have cleaned the carbs out 2-3 times, replaced the spark plugs, cleaned the fuel tank, checked the fuel petcock for proper operation, replaced fuel line, and replaced intake boot o-rings. A compression test came out at 130psi and 140psi. When I first started on the bike, i had the stock airbox and filter. I ran it w/ no lid, no filter, and have currently installed some UNI pods, and no change. I checked the spark at the plugs, and it is firing everytime. It gets a blue spark, but to my experience w/ cars I expected a fatter spark. I don't think this is the problem, as I am fairly unexperienced with bikes. I tried tightening up the plug gap about .004" (I think....gotta recheck) but to no avail. I've ran it w/ the petcock on Prime, ON, the fuel lid removed...nothing.
Next problem, probably related: upon getting the bike good and warm from riding for about 5-10 minutes, it will start misfiring bad below 2k. It will misfire, and after 3-5 seconds of no throttle it will die out. It runs normally (aside from the first problem) above 2k. This also is independent of throttle position.
While I'm still working on the carbs a bit, I pulled the plugs during the higher-RPM misfires and see nothing extroardinary:
I no longer think it's a carb problem, and am leaning towards an ignition/electrical problem. My bike has the electronic ignition, and I don't think it's the coils (it doesn't seem isolated to one cylinder). I have recently been jumping it off my battery jumper box to get it started, due to a battery that went dead (a new one's in order).
Any ideas on what to try next? This is getting extremely frustrating! :x
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